Biblio

Yping Chen, Pettis, J. S., Zhao, Y., Liu, X., Tallon, L. J., Sadzewicz, L. D., Li, R., Zheng, H., Huang, S., Zhang, X., Hamilton, M. C., Pernal, S. F., Melathopoulos, A. P., Yan, X., and Evans, J. D., “Genome sequencing and comparative genomics of honey bee microsporidia, Nosema apis reveal novel insights into host-parasite interactions”, BMC Genomics, vol. 14, no. 1, p. 451, 2013.

Y. P. Chen, Pettis, J. S., Zhao, Y., Liu, X., Tallon, L. J., Sadzewicz, L. D., Li, R., Zheng, H., Huang, S., Zhang, X., Hamilton, M. C., Pernal, S. F., Melathopoulos, A. P., Yan, X., and Evans, J. D., “Genome sequencing and comparative genomics of honey bee microsporidia, Nosema apis reveal novel insights into host-parasite interactions”, BMC Genomics, vol. 14, p. 451, 2013.

X. Feng, Poplawsky, A. R., Nikolaeva, O. V., Myers, J. R., and Karasev, A. V., “Genome sequences of two field isolates of Bean common mosaic virus”, Phytopathology, vol. 102, no. 6, p. S6.9, 2012.

A. Juneja, Chaplen, F., and Murthy, G. Suryanaray, “Genome scale metabolic reconstruction of Chlorella variabilis for exploring its metabolic potential for biofuels.”, Bioresource Technology, vol. 213, pp. 103-10, 2016.

A. Juneja, Chaplen, F. W. R., and Murthy, G. S., “Genome scale metabolic reconstruction of Chlorella variabilis for exploring its metabolic potential for biofuels”, Bioresource technology, 2016.

P. Dharmawardhana, Ren, L., Amarasinghe, V., Monaco, M., Thomason, J., Ravenscroft, D., McCouch, S., Ware, D., and Jaiswal, P., “A genome scale metabolic network for rice and accompanying analysis of tryptophan, auxin and serotonin biosynthesis regulation under biotic stress”, Rice, vol. 6, 2013.

G. T. Slavov, DiFazio, S. P., Martin, J., Schackwitz, W., Muchero, W., Rodgers-Melnick, E., Lipphardt, M. F., Pennacchio, C. P., Hellsten, U., Pennacchio, L. A., Gunter, L. E., Ranjan, P., Vining, K. J., Pomraning, K. R., Wilhelm, L. J., Pellegrini, M., Mockler, T. C., Freitag, M., Geraldes, A., El-Kassaby, Y. A., Mansfield, S. D., Cronk, Q. C. B., Douglas, C. J., Strauss, S. H., Rokhsar, D., and Tuskan, G. A., “Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa”, New Phytologist, vol. 19, no. 3, pp. 713 - 725, 2012.

V. Shulaev, Sargent, D. J., Crowhurst, R. N., Mockler, T. C., Folkerts, O., Delcher, A. L., Jaiswal, P., Mockaitis, K., Liston, A., Mane, S. P., Burns, P., Davis, T. M., Slovin, J. P., Bassil, N., Hellens, R. P., Evans, C., Harkins, T., Kodira, C., Desany, B., Crasta, O. R., Jensen, R. V., Allan, A. C., Michael, T. P., Setubal, J. Carlos, Celton, J. - M., D Rees, J. G., Williams, K. P., Holt, S. H., Rojas, J. Jairo Ruiz, Chatterjee, M., Liu, B., Silva, H., Meisel, L., Adato, A., Filichkin, S. A., Troggio, M., Viola, R., Ashman, T. - L., Wang, H., Dharmawardhana, P., Elser, J., Raja, R., Priest, H. D., Bryant, D. W., Fox, S. E., Givan, S. A., Wilhelm, L. J., Naithani, S., Christoffels, A., Salama, D. Y., Carter, J., Girona, E. Lopez, Zdepski, A., Wang, W., Kerstetter, R. A., Schwab, W., Korban, S. S., Davik, J., Monfort, A., Denoyes-Rothan, B., Arus, P., Mittler, R., Flinn, B., Aharoni, A., Bennetzen, J. L., Salzberg, S. L., Dickerman, A. W., Velasco, R., Borodovsky, M., Veilleux, R. E., and Folta, K. M., “The genome of woodland strawberry(Fragaria vesca).”, Nature genetics, vol. 43, pp. 109-16, 2011.

K. E. Bushley, Raja, R., Jaiswal, P., Cumbie, J. S., Nonogaki, M., Boyd, A. E., C Owensby, A., Knaus, B. J., Elser, J., Miller, D., Di, Y., McPhail, K. L., and Spatafora, J. W., “The Genome of Tolypocladium inflatum: Evolution, Organization, and Expression of the Cyclosporin Biosynthetic Gene Cluster”, PLOS Genetics, vol. 9, 2013.

D. Armisén, Rajakumar, R., Friedrich, M., Benoit, J. B., Robertson, H. M., Panfilio, K. A., Ahn, S. - J., Poelchau, M. F., Chao, H., Dinh, H., and al., et, “The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water”, BMC Genomics, vol. 19, no. 1, 2018.

J. C. Chiu, Jiang, X., Zhao, L., Hamm, C. A., Cridland, J. M., Saelao, P., Hamby, K. A., Lee, E. K., Kwok, R. S., Zhang, G., Zalom, F. G., Walton, V. M., and Begun, D. J., “Genome of Drosophila suzukii , the Spotted Wing Drosophila”, G3 Genes|Genomes|Genetics, vol. 3, no. 12, pp. 2257 - 2271, 2013.

A. A. Myburg, Grattapaglia, D., Tuskan, G. A., Hellsten, U., Hayes, R. D., Grimwood, J., Jenkins, J., Lindquist, E., Tice, H., Bauer, D., Goodstein, D. M., Dubchak, I., Poliakov, A., Mizrachi, E., Kullan, A. R. K., Hussey, S. G., Pinard, D., van der Merwe, K., Singh, P., van Jaarsveld, I., Silva-Junior, O. B., Togawa, R. C., Pappas, M. R., Faria, D. A., Sansaloni, C. P., Petroli, C. D., Yang, X., Ranjan, P., Tschaplinski, T. J., Ye, C. - Y., Li, T., Sterck, L., Vanneste, K., Murat, F., Soler, M., San Clemente, H., Saidi, N., Cassan-Wang, H., Dunand, C., Hefer, C. A., Bornberg-Bauer, E., Kersting, A. R., Vining, K., Amarasinghe, V., Ranik, M., Naithani, S., Elser, J., Boyd, A. E., Liston, A., Spatafora, J. W., Dharmwardhana, P., Raja, R., Sullivan, C., Romanel, E., Alves-Ferreira, M., Külheim, C., Foley, W., Carocha, V., Paiva, J., Kudrna, D., Brommonschenkel, S. H., Pasquali, G., Byrne, M., Rigault, P., Tibbits, J., Spokevicius, A., Jones, R. C., Steane, D. A., Vaillancourt, R. E., Potts, B. M., Joubert, F., Barry, K., Pappas, G. J., Strauss, S. H., Jaiswal, P., Grima-Pettenati, J., Salse, J., Van de Peer, Y., Rokhsar, D. S., and Schmutz, J., “The genome of Eucalyptus grandis.”, Nature, vol. 510, pp. 356-62, 2014.

A. A. Myburg, Grattapaglia, D., Tuskan, G. A., Hellsten, U., Hayes, R. D., Grimwood, J., Jenkins, J., Lindquist, E., Tice, H., Bauer, D., Goodstein, D. M., Dubchak, I., Poliakov, A., Mizrachi, E., Kullan, A. R. K., Hussey, S. G., Pinard, D., van der Merwe, K., Singh, P., van Jaarsveld, I., Silva-Junior, O. B., Togawa, R. C., Pappas, M. R., Faria, D. A., Sansaloni, C. P., Petroli, C. D., Yang, X., Ranjan, P., Tschaplinski, T. J., Ye, C. - Y., Li, T., Sterck, L., Vanneste, K., Murat, F., Soler, çal, San Clemente, élène, Saidi, N., Cassan-Wang, H., Dunand, C., Hefer, C. A., Bornberg-Bauer, E., Kersting, A. R., Vining, K. J., Amarasinghe, V., Ranik, M., Naithani, S., Elser, J., Boyd, A. E., Liston, A., Spatafora, J. W., Dharmwardhana, P., Raja, R., Sullivan, C., Romanel, E., Alves-Ferreira, M., ülheim, C., Foley, W., Carocha, V., Paiva, J., Kudrna, D., Brommonschenkel, S. H., Pasquali, G., Byrne, M., Rigault, P., Tibbits, J., Spokevicius, A., Jones, R. C., Steane, D. A., Vaillancourt, éE., Potts, B. M., Joubert, F., Barry, K., Pappas, G. J., Strauss, S. H., Jaiswal, P., Grima-Pettenati, J., Salse, érôme, Van de Peer, Y., Rokhsar, D. S., and Schmutz, J., “The genome of Eucalyptus grandis”, Nature, vol. 51, no. 75, pp. 356 - 362, 2014.

R. VanBuren, Bryant, D., Bushakra, J. M., Vining, K. J., Edger, P. P., Rowley, E. R., Priest, H. D., Michael, T. P., Lyons, E., Filichkin, S. A., Dossett, M., Finn, C. E., Bassil, N. V., and Mockler, T. C., “The genome of black raspberry (Rubus occidentalis).”, Plant J, vol. 87, no. 6, pp. 535-47, 2016.

O. Mezei, Ross-Viola, J. S., Mullen, E., Li, Y., and Shay, N. F., “Genetically-altered PPAR-alpha knockout mice indicate hypolipidemic actions of soy isoflavones occur via PPAR-alpha dependent and independent mechanisms”, Physiological Genomics, vol. 26, no. 1, pp. 8-14, 2006.

B. Singh, Sharma, J., Sood, S., Bhardwaj, V., Siddappa, S., Dalamu, D., Kardile, H. B., Sharma, V., · Dipta, B., Kumar, V., Dua, ·V. K., Goutam, U., and Pandey, ·N. K., “Genetic Variations in Tuber Dry Matter (%), Yield and Mineral Concentrations in a Diversity Panel of Tetraploid Potatoes”, 123AD.

I. Reich, Gormally, M., A. Allcock, L., McDonnell, R., Castillejo, J., Iglesias, J., Quinteiro, J., and Smith, C. J., “Genetic study reveals close link between Irish and Northern Spanish specimens of the protected Lusitanian slug Geomalacus maculosus”, Biological Journal of the Linnean Society, vol. 116, pp. 156–168, 2015.

I. Reich, Gormally, M., A. Allcock, L., McDonnell, R., Castillejo, é, Iglesias, J., Quinteiro, J., and Smith, C. J., “Genetic study reveals close link between Irish and Northern Spanish specimens of the protected Lusitanian slug Geomalacus maculosus”, Biological Journal of the Linnean Society, vol. 116, no. 1, pp. 156 - 168, 2015.

P. A. Morin, C. Baker, S., Brewer, R. S., Burdin, A. M., Dalebout, M. L., Dines, J. P., Fedutin, I., Filatova, O., Hoyt, E., Jung, J. - L., Lauf, M., Potter, C. W., Richard, G., Ridgway, M., Robertson, K. M., and Wade, P. R., “Genetic structure of the beaked whale genus Berardius in the North Pacific, with genetic evidence for a new species”, Marine Mammal Science, vol. 33, no. 1, pp. 96 - 111, 2017.

N. Rosa F. Castillo, Bassil, N., Wada, S., and Reed, B. M., “Genetic stability of cryopreserved shoot tips of Rubus germplasm”, In Vitro Cellular & Developmental Biology - Plant, vol. 46685882120182418340232418275423232522384727292920572094430221109536292263011612918235199191112425, no. 3, pp. 246 - 256, 2010.

S. A. Mehlenbacher, “Genetic resources for hazelnut: state of the art and future perspectives”, Acta Hort., vol. 845, pp. 159-162, 2009.

T. A. Parker, Gallegos, J. Acosta, Beaver, J., Brick, M., Brown, J. K., Cichy, K., Debouck, D. G., Delgado-Salinas, A., Dohle, S., Ernest, E., and , “Genetic Resources and Breeding Priorities in Phaseolus Beans: Vulnerability, Resilience, and Future Challenges”, Plant Breeding Reviews, vol. 46, pp. 289–420, 2022.

K. J. Vining, Contreras, R., Ranik, M., and Strauss, S. H., “Genetic methods for mitigating invasiveness of woody ornamental plants: Research needs and opportunities.”, HortScience, vol. 47, no. 9, 2012.

P. Castro, Bushakra, J. M., Stewart, P., Weebadde, C. K., Wang, D., Hancock, J. F., Finn, C. E., Luby, J. J., and Lewers, K. S., “Genetic mapping of day-neutrality in cultivated strawberry”, Molecular Breeding, vol. 35115109107141385673488113109251664110361262169136159121107641791091121145124124187413012814550109828310110131249312783123, no. 22, 2015.

J. M. Bushakra, Bryant, D. W., Dossett, M., Vining, K. J., VanBuren, R., Gilmore, B. S., Lee, J., Mockler, T. C., Finn, C. E., and Bassil, N. V., “A genetic linkage map of black raspberry (Rubus occidentalis) and the mapping of Ag 4 conferring resistance to the aphid Amphorophora agathonica”, Theoretical and Applied Genetics, vol. 128, no. 81004–1006, pp. 1631 - 1646, 2015.